SNP Profiles of LCT EEN 163/D View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AA	AC	GG	TT	CC	AG	CC	TT	AA	GG	AA	CC	GG
1._RUQ_180	_	_	AC	GG	TT	CC	AG	CC	TT	_	GG	AA	CC	GG
2._RUQ_180	_	_	AC	_	_	_	AG	_	_	_	_	AA	_	_
3._RUQ_180	GG	AA	AC	CC	AA	CC	AG	GG	TT	AA	_	AA	_	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	TT	AA	TT	CC	CC	CC	TT	TT	CC	AA	CT	AA
1._RUQ_180	GG	CC	TT	_	TT	_	CC	CC	TT	_	_	_	_	AA
2._RUQ_180	GG	CC	_	AA	TT	CC	CC	_	_	_	_	_	_	AA
3._RUQ_180	GG	CC	AA	_	AA	GG	GG	_	AA	AA	CC	AA	AG	AA

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	CC	GG	AA	TT	GG	TT	AC	TT	TT	CC	GG	CC	X_X	X_X
1._RUQ_180	CC	_	_	_	GG	_	_	_	TT	CC	GG	_	X_X	X_X
2._RUQ_180	_	GG	_	_	GG	_	_	_	_	CC	_	_	X_X	X_X
3._RUQ_180	GG	GG	AA	_	_	AA	_	AA	AA	GG	GG	GG	X_X	X_X

Input profile: LCT_EEN_163_/D

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 4A A 104 T1

Dapeng Zhang, 2014

1._LCT_EEN_163_/D RUQ_180

identical
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._LCT_EEN_163_/D RUQ_180

identical
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

3._LCT_EEN_163_/D RUQ_180

48.5 %
33 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP577
16	TcSNP591	17	TcSNP619	18	TcSNP645	19	TcSNP723	20	TcSNP836
21	TcSNP872	22	TcSNP878	23	TcSNP891	24	TcSNP917	25	TcSNP929
26	TcSNP953	27	TcSNP994	28	TcSNP998	29	TcSNP1060	30	TcSNP1062
31	TcSNP1075	32	TcSNP1165	33	TcSNP1253	34	TcSNP1270	35	TcSNP1350
36	TcSNP1414	37	TcSNP1442	38	TcSNP1458	39	TcSNP1484	40	TcSNP1520